Training |
Date & Institution (Organizer) |
Trainee(s) |
Certificate/program |
CoLoMoTo Workshop (logical modelling)
|
17-19 July, 2017 Institut de biologie de l´ENS (IBENS), Paris, France |
The list of speakers is available here |
PDF
|
The Artificial Intelligence Workshop at the French Academy of Sciences
|
October 2016 The Academy of Sciences. Paris, France |
The list of trainees is available here |
PDF
|
Training on IBM Watson solutions for life-sciences
|
September 2016 Genopole Campus. Evry, France |
The list of trainees is available here |
PDF
|
Summer University at Pasteur Institute for entrepreneurship in life-science.
|
July 2016 Institut Pasteur and Medicen Paris Region Paris, France |
The list of trainees is available here |
PDF
|
Data Science Tech Institute (DSTI) Courses.
|
June 2016 DSTI Campus, Paris, France |
Prof Fabien Gandon (INRIA-CNRS) |
PDF
|
Training on OpenStack technology and Cloud Computing.
|
May 2015 CloudwattBoulogne Billancourt, France |
Cloudwatt and Objectif Libre teams |
PDF
|
Workshop Big Data and Data Science.
|
23 May 2016 DSTI Campus, Paris, France |
Dr Gregory Piatetsky-Shapiro (KDnuggets) |
PDF
|
Training on 3DEXPERIENCE platform and related software as part of my participation to the BioIntelligence workshop.
|
April 2015 Dassault SystèmesVélizy - France. |
3DEXPERIENCE IT Department |
PDF
|
Genetics of gene expression in humans: data structures, algorithms, and inference
|
July 2011 International Society for Computational Biology TutorialsVienna, Austria |
Prof Vincent J. Carey (Harvard Medical School, Boston, USA) |
PDF |
Modern statistical and sparse coding methods for genetic association study: structured genome-transcriptome-phenome association analysis
|
July 2011 International Society for Computational Biology Tutorials Vienna, Austria |
Profs Eric P. Xing and Seyoung Kim (Carnegie Mellon University, Pittsburgh, USA) |
PDF
|
HiTSEQ 2011: High Throughput Sequencing: Algorithms & Methodologies |
July 2011 International Society for Computational Biology Tutorials Vienna, Austria |
The list of trainees is available here |
PDF |
Weighted network anaylsis: Applications in genomics and systems biology
|
27-28 June 2011 The Bonn-Aachen International Center for Information Technology (B-IT) (Prof Joerg Zimmermann)Bonn, Germany |
Prof Steve Horvath Department of Biostatistics of the University of California |
PDF |
Computational analysis of single and combinatorial gene perturbations
|
27th June - 2nd July, 2009 International Society for Computational Biology Tutorials Stockholm, Sweden |
Dr Chad L. Meyers(University of Minnesota)& Dr Florian Markowetz(Cancer UK Cambridge Research Institute)
|
PDF
|
From protein-protein interactions to networks and pathways
|
27th June - 2nd July, 2009 International Society for Computational Biology Tutorials Stockholm, Sweden |
Dr Javier De Las Rivas(Bioinformatics and Functional Genomics Research Group, Salamanca,Spain)
|
PDF
|
Marie Curie grant writing training
|
26 May 2011 University of Lübeck, Institute for Signal processing Lübeck, Germany |
Ms Hanna Pletziger (Alexander von Humboldt Foundation)
|
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|
Methematical modeling of infection disease in epidemiology
|
Januray 2008 University Paris VI (Prof Alain-Jacques valleron)Paris, France |
Prof Alain-Jaques Valleron (INSERM U707)
|
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|
European Bioinformatics Institute (EBI) Tutorials
|
March 17-19th, 2008 The Consortium for Post-Genome Science. Manchester, UK |
Dr Wolfgang Huber (EBI, Hinxton, UK)
|
Link
|
PhD courses of Statistical Anaylsis of Microarary Expression data with R and Bioconductor (ECTS credits:5)
|
November 5-9th, 2007 Department of Mathematical Sciences University of Copenhagen (Prof Niels Richard Hansen) Copenhagen, Danemark |
- Prof Gordon Smyth(Walter and Eliza Hall Institute of Medical Research, Australia)
- Dr Wolfgang Huber (EBI, UK)
- Prof Vincent Carey (Harvard Medical School, Boston, USA)
- Dr Denise Scholtens (Northwestern University, Chicago, USA)
- Dr Steffen Durinck (Lawrence Berkeley National Laboratory, USA)
|
PDF
|
Workshop on Molecular and Statistical Genomic Epidemiology
|
May, 13-16, 2007 Le Centre National de Genotypage (Profs Ivo G. Gut, Mark Lathrop, and Dan Weeks)Maison de la Chimie Paris, France |
The list of trainees & speakers is available here
|
PDF
|
Advanced courses: Principles and methods for genomics analysis
|
November 17th-December 15th, 2006 Pasteur Institute Paris (Dr Isabelle Saint Girons) Paris, France |
The list of trainees is available here
|
PDF
|
Business and management practices
|
Institute of doctoral schools of Paris VI & Partners United Paris, France |
Ms Anne Cherret & Mr Abdellah Ben Mlih (Partners United)
|
PDF
|
Machine learning and data mining
|
April 27-28th, 2006 University Paris 13 - Institut Galiliee Paris, France |
The list of trainees is available here
|
PDF
|
Methods for detection of alternative splicing from exon array data
|
July 18th, 2006 Institut Curie (Prof Emmanuel Barillot) Paris, France |
Prof Terry Speed (Department of statistics and program in Biostatistics, University of California)
|
PDF
|
ChIP-chip and high density tiling arrays: issues in design and analysis
|
July 18th, 2006 Institut Curie (Prof Emmanuel Barillot) Paris, France |
Prof Terry Speed (Department of statistics and program in Biostatistics, University of California)
|
PDF
|
Workshop LIX - Genomics
|
December 12-14th, 2005 Ecole polytechnique Palaiseau - Laboratory LIX Paris, France |
The list of trainees is available here
|
PDF
|
Training in Computer Sciences
|
Nov-Dec 1995 The Algerian Services & Technologies of Networks (ALSTON), Batna - Algeria |
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|
PDF
|
University / Research institution |
Education / trainings |
Skills developed |
Acknowledgments |
 |
Postdoctoral Fellowship
July 1st 2010 - December 31th 2011
University of Luebeck
Department of Medicine Clinik II (Cardiology), Luebeck, Germany,
Postdoctoral supervisor: Prof H. Schunkert |
- Genetics of myocardial infarction
- Preprocessing and analysis of miRNAs data
- System genetics
- Paper writing skills
- Cardiology
- Management of collaborative projects
- Grants writing
- German language skills |
- Prof. H. Schunkert
- Mrs R. Domeier
- My professors of German language |
|
PhD candidate in Public Health, Epidemiology and Biomedical Information Sciences, Option : Bioinformatics
November 1st 2005 - June 30th 2010
Doctoral School Pierre Louis of Public Health, Epidemiology and Biomedical Information - ED 393.
(Profs A. J. Valeron and D. Costagliola)
University Pierre and Marie Curie (Paris VI)
The French Institute of Health and Medical Research (INSERM)
Thesis title: Bioinformatics approaches for analyzing genomics and microarray data in
cardiovascular research.
Paris, France,
PhD director: Dr F. Cambien
PhD mentor: Prof D. Costagliola
|
- Human genetics
- Molecular biology
- Genetics of cardiovascular disease
- Genetics of atherosclerosis
- Microarray gene expression
- Genome-wide association studies (GWAS)
- Bioinformatics and computational biology
- Manuscripts writing
- Management of large scale genomics projects |
- Prof A.J. Valleron
- Prof D. Costagliola
- Dr F. Cambien
- Mme E. Guilloux
- My colleagues, my collaborators, and Cardiogenics partners.
- La Fondation pour la Recherche Medicale (FRM)
- INSERM
- Cardiogenics Consortium
|
|
Masters of Research in History of Sciences and Techniques
2008 - 2009
University Paris 1 - Pantheon-Sorbonne
Dissertation title: History of reverse engineering in biology: a new approach of systems biology or a
new interface between engineering and life sciences?
Supervisors: Prof. B. Belhoste (University Paris 1 - Pantheon-Sorbonne, Paris, France)
& Prof. E. Fox Keller (Massachusetts Institute of Technology, USA) |
- History of sciences
- History of biology and genetics
- Reverse engineering
- Systems biology
|
- Prof Bruno Belhoste
|
|
University Diploma (DU) of Bioengineering, Valorization of Applied Research and Biomedical Innovation
2004-2005
University Pierre and Marie Curie (Paris VI), Paris, France
Dissertation title: Protection of persons in biomedical research: risks related to the
introduction of new communication technologies such as wireless and mobile communication.
Supervisor: Prof. A. Sezeur
Dissertation defended in 2005
|
- Valorization of Research
- Patent protection and innovation
- Business intelligence
- University-industry partnerships
- Public funding for R&D, development capital fund
- Legal framework for research
- Ethics and regulation of clinical research
- Pharmaceutical industry
- Intellectual property
- Creation of high-tech companies
|
- Prof. A. Sezeur
- All my professors
|
|
Research training in medical informatics
2003-2004
European Hospital Georges Pompidou
Department of medical informatics (Prof P. Degoulet) and department of radiology (Prof G. Frija)
CIRA, a High-Tech Company for image compression and technology of networks (Prof Hochberg S.)
|
- Compression of medical images
- Image J environment
- Wavelet theory
- Signal processing
- Telemedicine and teleradiology
- Medicine: cerebrovascular accident (CVA), radiology |
- My supervisors, Dr D. Heudes and Mr S. Topin
|
|
Masters of research in medical informatics and communication technologies
2002-2004
University Pierre and Marie Curie (Paris VI), Paris, France
SPIM laboratory (Laboratoire de Sante Publique et Informatique Medicale; laboratory of public health and medical informatics)
Dissertation title: Quantitative and visual assessment of a medical image compression algorithm based on wavelet transformation. Elaboration of optimized compression approach.
Supervisors: Dr D. Heudes (European Hospital George Pompidou and SPIM laboratory) & Mr S. Topin (high technology CIRA company)
Masters thesis defended in 2004
|
- Medical informatics
- Bioinformatics
- Data mining
- Networking and communication technologies in healthcare environments
- Health information systems
- Processing of medical images
- Numerical simulation
- Standards for medical data management
- Medical ontologies and knowledge modeling
- Decision support systems
|
- My professors
|
|
Training for engineering final year project
2000-2001
University hospital Ibn Badis of Constantine
Laboratory of audit and quality of healthcare (Prof M. Ouchtati)
Supervisors: Prof Ouchtati M and Dr Boussouf M |
- Healthcare information systems
- Sharing of medical records
- Intranet and networks
- Web development and administration
- Deployment of Intranets
- Shared medical record |
- My professors
|
|
Engineering studies of computer science
Graduated in 2001 (with honors and ranked first)
Faculty of Engineering Sciences
University Mentouri of Constantine
Constantine, Algeria
Dissertation title: Integrating new information and communication technologies in healthcare. Deployment of an intranet and shared medical record in the University Hospital of Constantine.
Supervisors: Prof Ouchtati M. (University Hospital of Constantine) & Dr Boussouf M. (Faculty of Engineering Sciences Constantine)
Dissertation defended in 2001
|
- Computer architecture
- Probability and statistics
- Mathematics
- Advanced operating systems
- Graph theory
- Networking and communication technologies
- Data analysis
- Compilation
- Automatic and servo control system
- Advanced Database Systems
- Programming language theory (PLT)
- Artificial intelligence
- Signal processing
- English for computer science and networking |
- My professors
- My supervisors: Prof M. Ouchtati and Dr M. Boussouf
|
|
Training for final year graduation project
1995-1996
NAFTAL (the principal company of petroleum-based fuels in Algeria), Batna, Algeria
|
- Enterprise information system
- Development of databases and software
- Development of commercial software Visual object-oriented procedural programming language.
- Management |
- My supervisor Dr Zidat Samir
|
|
Applied studies in computer sciences
Graduated in 1997 with the mention "very good"
Faculty of Engineering Sciences
University of Batna, Algeria
Dissertation title "Conception and development of commercial management software".
Supervisor: Dr S. Zidat
|
- Mathematics
- Electronics and microprocessor architecture
- Low-level programming language (Assembly language)
- Algorithmic and high-level programming language
- File systems and databases
- Software engineering
- Operating systems
- Operational research
- Economy and management
- Applied statistics
- Technical English
|
- Algerian Ministry of education
- My parents
|
|
Baccalaureat (high school diploma; "Abitur" in German) of life-Sciences,
1993
Lycee Elbeh-Lakhdar Khencheka
Khencheka, Algeria.
(Important : Due to the political crisis in Algeria at this period, some of my professors were arrested because of their political ideologies, only me and two other colleagues have obtained this diploma on the whole class).
|
- Mathematics
- Physics
- Chemistry
- Life-sciences
- Philosophy
- English
- French
- Arabic
- History and Geography |
- My teachers
- My parents
|